Affinage · Toxoplasma gondii

PEX3

peroxisomal biogenesis factor 3, putative · UniProt A0A125YZQ1

Annotated
2026-09-08
2 papers in source corpus 2 papers cited in narrative 2 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PEX3 is predicted to be a peroxin of the peroxisome biogenesis machinery in Toxoplasma gondii, identified as part of a complete set of peroxins recovered by bioinformatic screening of apicomplexan genomes, consistent with the presence of peroxisome biogenesis, division, and protein import machinery in Coccidia (PMID:29126146). No direct experimental characterization of the T. gondii PEX3 protein itself has been reported in the available corpus. In a distinct host-directed context, host cell PEX3 physically interacts with the T. gondii dense granule protein GRA23, as shown by pull-down/mass spectrometry, bimolecular fluorescence complementation, and co-immunoprecipitation, indicating the parasite may engage host peroxisomal factors during infection (PMID:40417354). The functional consequences of this interaction and any activity of the parasite's own PEX3 remain uncharacterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 2 steps
  1. 2017 Low

    Whether T. gondii possesses the genetic capacity for peroxisome biogenesis was unknown; genomic screening established that a complete peroxin set, including PEX3, is present, placing PEX3 within a candidate peroxisome biogenesis pathway.

    Evidence Bioinformatic/genomic screening for peroxins and PTS1/PTS2 targeting signals across apicomplexan genomes

    PMID:29126146

    Open questions at the time
    • Computational prediction only; no experimental validation of T. gondii PEX3 protein function or localization
    • Whether peroxisomes are actually assembled at any life cycle stage is not demonstrated
    • No demonstrated role for PEX3 in parasite biology
  2. 2025 Medium

    Whether the parasite engages host peroxisomal machinery was unaddressed; identification of a physical interaction between host PEX3 and the parasite dense granule protein GRA23 established a candidate parasite-host interface at the peroxisome.

    Evidence Pull-down/mass spectrometry, BiFC, and Co-IP in a single study

    PMID:40417354

    Open questions at the time
    • No functional consequence of the PEX3-GRA23 interaction demonstrated
    • Interaction is with host PEX3, not the parasite's own PEX3 ortholog
    • Whether host peroxisomal function is modulated during infection is untested

Open questions

Synthesis pass · forward-looking unresolved questions
  • The biochemical activity, localization, and in vivo role of the T. gondii PEX3 protein itself remain unknown, as does the functional outcome of the host PEX3-GRA23 interaction.
  • No knockout, knockdown, or rescue of T. gondii PEX3
  • No demonstration of peroxisome assembly or PEX3 localization in the parasite
  • No functional readout linking the host PEX3-GRA23 interaction to infection outcome

Mechanism profile

Synthesis pass · controlled-vocabulary classification

Evidence

Reading pass · 2 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2017 Bioinformatic analysis identified a complete set of peroxins (including PEX3) in Toxoplasma gondii and other Coccidia, consistent with peroxisome biogenesis, division, and protein import machinery being present; life cycle stage-specific presence of peroxisomes in T. gondii was suggested. Bioinformatic/genomic screening for peroxins and peroxisomal targeting signals (PTS1/PTS2) across apicomplexan genomes Genome biology and evolution Low 29126146
2025 Host cell peroxisomal biogenesis factor 3 (PEX3) physically interacts with T. gondii dense granule protein GRA23, as validated by pull-down/mass spectrometry, bimolecular fluorescence complementation (BiFC), and co-immunoprecipitation (Co-IP), suggesting parasite-mediated modulation of host peroxisomal functions. Pull-down assay coupled with mass spectrometry, bimolecular fluorescence complementation (BiFC), co-immunoprecipitation (Co-IP) Frontiers in veterinary science Medium 40417354

Source papers

Stage 0 corpus · 2 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2017 Genomic and Proteomic Evidence for the Presence of a Peroxisome in the Apicomplexan Parasite Toxoplasma gondii and Other Coccidia. Genome biology and evolution 17 29126146
2025 Molecular interactions of Toxoplasma gondii dense granule 23 (GRA23) with host proteins PEX3 and TRAP1. Frontiers in veterinary science 1 40417354