Affinage · Toxoplasma gondii

Affinage · Toxoplasma gondii provides gene cards for orthologous groups across T. gondii strains ME49, GT1, RH88, and VEG. Each card shows cross-strain sequence identities and strain-level locus tags drawn from ToxoDB-68.

Annotated cards also carry a mechanistic narrative drawn from the Toxoplasma literature — a year-by-year history with the open questions made explicit, and a mechanism profile. Findings cite their papers and name the strain they were shown in when the paper does; cards the audit flags carry a note on the gene page.

10,904
Genes
4,505
PMIDs indexed
3,748
Findings
09/2026
Build
  1. PubMed · Toxoplasma
    organism-gated corpus, citation-ranked
  2. Reading pass
    extracts dated findings, tagged by strain and PMID
  3. Synthesis pass
    arranges findings into causal narrative, keeping strains distinct
  4. Affinage record
    narrative · history · open questions · profile

Cross-strain

Each card groups orthologous loci across ME49, GT1, RH88, and VEG with pairwise amino-acid identity.

Alias-aware

Search by ToxoDB locus tag, common name (e.g. GRA1, ROP18), or cross-strain alias.

Structured for tools

Strain memberships and identity data exposed over a simple JSON API.