{"gene":"TG_304680","gene_symbol":"DDI1","run_date":"2026-09-08T15:15:12","timeline":{"discoveries":[],"current_model":"No mechanistic findings in the available literature."},"narrative":{"mechanistic_narrative":"No mechanistic discoveries found in literature.","teleology":[],"mechanism_profile":null,"strain_conflicts":[]},"prefetch_data":{},"corpus_meta":[],"cost":{"stage1":{"model":"claude-sonnet-4-6","input_tokens":2452,"output_tokens":34,"usd":0.003933,"stage1_stop_reason":"end_turn"},"stage2":{"model":"","input_tokens":0,"output_tokens":0,"usd":0.0},"total_usd":0.003933,"stage1_batch_id":"msgbatch_01S6GjoYQm8LTPUsdhASdqag","stage2_batch_id":"msgbatch_01VX63RTMdBJqsG6gQMqoCjz","note":"batch pricing = 50% of standard"},"stage1_raw":"```json\n{\n  \"discoveries\": [],\n  \"current_model\": \"No mechanistic findings in the available literature.\"\n}\n```","stage2_raw":"","audit_flag":{"gene":"TG_304680","tier":"COVERAGE","verdict":"Coverage note","subtype":"corpus_generic","uniprot_band":"empty","rules_fired":"R1","issue":"R1: gene named in 0/98 (0%) of its corpus abstracts and Stage 1 extracted no discoveries — no gene-specific literature retrieved"},"strains":[{"strain":"ME49","gene_id":"TGME49_304680","name":"DDI1","product":"DNA damage-inducible protein 1","uniprot_acc":"A0A125YIN9","chromosome":"TGME49_chrVIIa","start_pos":620078},{"strain":"GT1","gene_id":"TGGT1_304680","name":null,"product":"ubiquitin family protein","uniprot_acc":null,"chromosome":"TGGT1_chrVIIa","start_pos":595893},{"strain":"RH88","gene_id":"TGRH88_033200","name":null,"product":"ubiquitin family protein","uniprot_acc":null,"chromosome":"CM023088","start_pos":700231},{"strain":"VEG","gene_id":"TGVEG_304680","name":null,"product":"ubiquitin family protein","uniprot_acc":"B9QR20","chromosome":"TGVEG_chrVIIa","start_pos":677340}]}