{"gene":"TG_222090","gene_symbol":"","run_date":"2026-09-10T21:09:19","timeline":{"discoveries":[],"current_model":""},"narrative":{"mechanistic_narrative":"No mechanistic discoveries found in literature.","teleology":[],"mechanism_profile":null,"strain_conflicts":[]},"prefetch_data":{},"corpus_meta":[{"pmid":"11906451","id":"PMC_11906451","title":"Toxoplasma gondii Rab5 enhances cholesterol acquisition from host cells.","date":"2002","source":"Cellular microbiology","url":"https://pubmed.ncbi.nlm.nih.gov/11906451","citation_count":48,"is_preprint":false},{"pmid":"27642004","id":"PMC_27642004","title":"Imaging flow cytometry analysis of intracellular pathogens.","date":"2016","source":"Methods (San Diego, Calif.)","url":"https://pubmed.ncbi.nlm.nih.gov/27642004","citation_count":46,"is_preprint":false},{"pmid":"32714877","id":"PMC_32714877","title":"Toxoplasma gondii Mechanisms of Entry Into Host Cells.","date":"2020","source":"Frontiers in cellular and infection microbiology","url":"https://pubmed.ncbi.nlm.nih.gov/32714877","citation_count":32,"is_preprint":false},{"pmid":"31432591","id":"PMC_31432591","title":"A comparative in silico analysis of Rab5 proteins from pathogenic species to find its role in the pathogenesis.","date":"2019","source":"Journal of molecular recognition : JMR","url":"https://pubmed.ncbi.nlm.nih.gov/31432591","citation_count":4,"is_preprint":false}],"cost":{"stage1":{"model":"claude-sonnet-4-6","input_tokens":6232,"output_tokens":1285,"usd":0.018985,"stage1_stop_reason":"end_turn"},"stage2":{"model":"claude-opus-4-8","input_tokens":6298,"output_tokens":2601,"usd":0.048258,"stage2_stop_reason":"end_turn"},"total_usd":0.067243,"stage1_batch_id":"msgbatch_01WokvBYTB6JLnYrpD4rXnyV","stage2_batch_id":"msgbatch_01M7hsQDvz6AqVC9DLVjQzzc","note":"batch pricing = 50% of standard","corrective_rerun":"2026-09-10 wrong-gene rerun (round-4 rules)","corrective_reason":"no remaining paper names this gene"},"stage1_raw":"","stage2_raw":"","audit_flag":null,"strains":[{"strain":"ME49","gene_id":"TGME49_222090","name":null,"product":"hypothetical protein","uniprot_acc":"A0A125YWQ9","chromosome":"TGME49_chrII","start_pos":865401},{"strain":"GT1","gene_id":"TGGT1_222090","name":null,"product":"hypothetical protein","uniprot_acc":null,"chromosome":"TGGT1_chrII","start_pos":848554},{"strain":"RH88","gene_id":"TGRH88_001110","name":null,"product":"unspecified product","uniprot_acc":null,"chromosome":"CM023083","start_pos":1020683},{"strain":"VEG","gene_id":"TGVEG_222090","name":null,"product":"Rab5-interacting (Rab5ip) protein","uniprot_acc":"B9PYS5","chromosome":"TGVEG_chrII","start_pos":869356}]}